Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904039.1_cds_XP_016454185.1_48236
CDS Infomation

[gene=LOC107778442] [db_xref=GeneID:107778442] [protein=probable protein phosphatase 2C 60] [protein_id=XP_016454185.1] [location=complement(join(20979..21254,22323..22377,24641..24693,26059..26135,26356..26479,26718..26843,27045..27198,30228..30336,31401..31464,32730..32846))] [gbkey=CDS]
Sequence

ATGGGTATATACCTGAGTACTCCGAAAACAGAGAAATTTTCAGAAGATGGTGAGAATGTT
AAGGTTAGATATGGTTTATCATCAATGCAAGGATGGCGAGCAACTATGGAAGATGCTCAT
GCAGCAATTACTGACTTGGATGCTTCCACTTCCTTTTTTGGTGTCTATGATGGTCATGGA
GGTAAAGTTGTTGCTAAATTTTGTGCCAAGTATCTACATCAGCAAGTGCTGAAGCATGAA
GCATATCTGCATGGAGATATTGGAACTTCAGTCCAGAAAGCCTTTTTCAGAATGGATGAG
ATGATGCGTGGTCAGAGAGGATGGAGGGAGCTGGCTGCGTTAGGGGATAGATTAAACAAG
TTTACGGGTATGATAGAGGGTCTTATGTGGTCTCCAAGAAACGGTGATGGAAACGGCAAT
ACTGATGATTGGGCCTTTGAGGAGGGGCCTCACTCTGATTTTCCTGGACCAACTTCTGGA
AGTACGGCTTGTGTTGCAATCATTAGAGAGAACCAAGTCATTGTTGCGAATGCTGGTGAT
TCGCGCTGTGTGATTTCACGGAAGGGCCAGGCGTATAATCTATCAAGGGATCACAAACCT
GATCTTGAGATTGAAAGAGAGAGGATCCTGAAAGCAGGTGGTTTCATCCATGCAGGACGT
GTTAATGGTAGCTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTCAAGCAGAATAAG
TTTTTGCCAGCTGAGAAGCAAGTTGTTACAGCCGATCCAGACATAAATATTGTTGAACTA
TGTGATGATGATGATTTTATTGTGCTCGCCTGTGATGGTGTGTGGGACTGCATGTCGAGC
CAGCAATTAGTGGACTTTATACATGAGCAGCTGAACTCGGAATCCAAGCTTTCAGCGATA
TGTGAAAGAGTTCTTGATCGGTGTTTGGCACCTACTGCTGGAGGTGAAGGATGCGATAAT
ATGACCATGATTTTAGTACAACTCAAAAAACCTATTCTCTCGGGGGCTTCTCCACGCGAT
GAACCATCGGCTTCTCCAGGCGATGAACCATCGGCTTCTCCAGGTGATGAGCTGTCAGCT
TTGAGTGAGAAACTCCCTGCTTCAGATGAAGTAAATGCTGAATCAAAACCAGCAGAATGT
GGATCAAGTTCATAA

Peptide Sequence

PEP ID

XP_016454185.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 60 [Nicotiana tabacum]
Sequence

MGIYLSTPKTEKFSEDGENVKVRYGLSSMQGWRATMEDAHAAITDLDASTSFFGVYDGHG
GKVVAKFCAKYLHQQVLKHEAYLHGDIGTSVQKAFFRMDEMMRGQRGWRELAALGDRLNK
FTGMIEGLMWSPRNGDGNGNTDDWAFEEGPHSDFPGPTSGSTACVAIIRENQVIVANAGD
SRCVISRKGQAYNLSRDHKPDLEIERERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK
FLPAEKQVVTADPDINIVELCDDDDFIVLACDGVWDCMSSQQLVDFIHEQLNSESKLSAI
CERVLDRCLAPTAGGEGCDNMTMILVQLKKPILSGASPRDEPSASPGDEPSASPGDELSA
LSEKLPASDEVNAESKPAECGSSS

Transcript Sequence

Gene sequence data has not been registered.